Mini Course 1: Stochastic biochemical reaction networks with absolute concentration
robustness
We will first introduce time-continuous Markov chains
arising in chemical reaction networks, with special emphasis on specific models
occurring in the cellular processing system. The course will next focus on
structural sources of robustness in biochemical reaction networks. A protein is
absolute robust when its equilibrium concentration is independent of the total
concentration of other proteins. In the deterministic setting, the structural
properties of the reaction network suffice
often to induce absolute robustness of some species. When the dynamics are
modeled as stochastic mass-action kinetics, such systems often get absorbed by
a set of states, so that the system is undergoing an extinction event. We will
explain recent results that give conditions ensuring that the process
settle down to a quasi-stationary distribution,
and characterize species having a quasi-stationary Poisson distribution
centered around the deterministic mean.